STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19651.16-phosphogluconolactonase protein. (332 aa)    
Predicted Functional Partners:
ERJ19652.1
Periplasmic binding protein.
 
  
 0.963
ERJ19653.1
ABC transporter permease protein.
 
   
 0.950
ERJ19650.1
ABC multidrug efflux transporter ATPase subunit protein.
 
    0.948
ERJ19647.1
ABC transporter substrate-binding protein.
 
    0.947
ERJ19648.1
ABC transporter permease protein.
 
     0.944
ERJ17563.1
Amine dehydrogenase protein; Belongs to the aromatic amine dehydrogenase light chain family.
   
  0.927
ERJ17735.1
Alcohol dehydrogenase cytochrome c protein; Overlaps CDS with the same product name.
 
 0.924
exaA
ExaA protein.
 
 0.911
ERJ18480.1
Cytochrome C protein.
 
  0.856
norB
Nitric oxide reductase subunit B protein.
  
 0.819
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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