STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19677.1Alcohol dehydrogenase protein; Overlaps CDS with the same product name. (76 aa)    
Predicted Functional Partners:
ERJ18531.1
Putative polyketide synthase protein.
  
 0.882
ERJ19676.1
Alcohol dehydrogenase protein; Overlaps another CDS with the same product name.
       0.773
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
    
 0.681
fadJ
Fatty acid oxidation complex subunit alpha protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.643
fadB
Fatty acid oxidation complex subunit alpha protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.643
ERJ19358.1
3-hydroxyacyl-CoA dehydrogenase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.643
ERJ18530.1
Alpha-beta hydrolase fold protein; Overlaps CDS with the same product name.
    
 0.630
paaZ
Bifunctional protein PaaZ.
  
 0.627
ERJ19678.1
DNA polymerase III subunit gamma-tau protein; Belongs to the LysR transcriptional regulatory family.
       0.488
ERJ20850.1
Long-chain acyl-CoA synthetase protein.
  
 0.484
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.