STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19681.1Branched-chain amino acid permease protein. (231 aa)    
Predicted Functional Partners:
ERJ18545.1
Putative membrane protein.
 
  
 0.847
ERJ19680.1
Shikimate kinase protein.
 
     0.811
ERJ19682.1
Branched-chain amino acid transport protein.
       0.775
ERJ20647.1
Glutamine ABC transporter periplasmic glutamine-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
     0.510
ERJ19679.1
3a7a12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase protein.
       0.499
ERJ20646.1
Amino acid ABC transporter permease protein.
  
     0.454
ERJ20109.1
Arginine-binding protein.
  
     0.412
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.