STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuCATP-binding component of hydroxymate-dependent iron ABC transporter protein. (255 aa)    
Predicted Functional Partners:
fhuB
Ferrichrome transport system permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.998
ERJ18798.1
Putative permease of ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.996
fepD
ABC transporter membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.993
ERJ19687.1
ABC Fe+3 hydroxamate transporter periplasmic siderophore binding protein.
 
 0.992
fecB
Iron dicitrate transport system permease protein FecB.
 
 0.955
btuF
Putative vitamin B12 transport protein.
 
 0.934
fecD
Iron dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.915
ERJ18804.1
PDDEXK 3 family protein.
  
 0.810
cobQ
Adenosylcobyric acid synthase protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
  0.781
yojI
Putative ABC-type multidrug-protein-lipid transport system.
 
    0.626
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.