STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19448.1Putative membrane protein. (144 aa)    
Predicted Functional Partners:
ERJ19447.1
Catechol 23-dioxygenase protein.
  
    0.808
ERJ19449.1
dTDP-4-dehydrorhamnose reductase protein; Belongs to the LysR transcriptional regulatory family.
 
     0.601
ERJ17593.1
Alkaline phosphatase protein; Belongs to the 5'-nucleotidase family.
  
  
  0.495
cynR
Transcriptional regulator CynR protein.
  
     0.494
yedY
Sulfoxide reductase catalytic subunit YedY protein.
  
 
 0.467
ERJ19078.1
Sulfite oxidase protein.
  
 
 0.467
thiF
Thiamine biosynthesis protein.
    
  0.444
rhdA
Sulfurtransferase protein.
  
 
  0.440
ERJ18211.1
Thiosulfate-3-mercaptopyruvate sulfurtransferase protein.
  
 
  0.440
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
  0.439
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.