STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19457.1NAD-dependent epimerase-dehydratase protein. (119 aa)    
Predicted Functional Partners:
ERJ19456.1
NADH dehydrogenase protein.
 
     0.908
ERJ19458.1
SnoaL-like domain protein.
 
    0.839
ERJ19200.1
Membrane protein putative.
   
    0.737
ERJ19455.1
Transcriptional regulator HxlR family protein.
 
  
 0.709
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.639
ERJ19425.1
Putative ral stress protein 26.
  
    0.551
sulA
Cell division inhibitor protein.
   
    0.550
ERJ19077.1
Putative integral membrane protein.
   
    0.550
arcA
Arginine deiminase protein.
   
    0.547
ERJ20057.1
Protein of unknown function DUF262.
  
    0.519
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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