STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmtAPhospholipid N-methyltransferase protein. (192 aa)    
Predicted Functional Partners:
pssA
Phosphatidylserine synthase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.723
psd
Phosphatidylserine decarboxylase proenzyme protein.
    
 0.678
psd-2
Phosphatidylserine decarboxylase proenzyme protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
 0.664
ERJ19475.1
Putative transcriptional regulator protein.
 
     0.595
ERJ18214.1
Hypothetical protein.
  
     0.576
ERJ19472.1
Ornithine-acylacyl carrier protein N-acyltransferase.
       0.518
ERJ19474.1
Putative membrane protein.
       0.516
ERJ18531.1
Putative polyketide synthase protein.
  
  
  0.495
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.