STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19497.1Putative lysine decarboxylase protein. (246 aa)    
Predicted Functional Partners:
ycjI
Putative carboxypeptidase protein.
       0.773
ERJ19529.1
Membrane-bound lytic peptidoglycan transglycosylase D protein.
   
  0.508
clpB
Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
       0.480
ERJ18999.1
Deoxyguanosine kinase protein.
    
  0.459
ERJ20278.1
Cleavage protein.
  
    0.442
ERJ17768.1
Cleavage protein.
  
    0.442
ERJ19945.1
tRNA nucleotidyltransferase CCA-adding enzyme protein.
   
  0.436
ERJ20784.1
2-haloacid dehalogenase protein.
 
  
  0.411
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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