STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19501.1Oxidoreductase protein. (276 aa)    
Predicted Functional Partners:
ERJ18190.1
Dioxygenase protein.
  
 0.763
ERJ17588.1
Catechol 23-dioxygenase protein.
  
 0.763
ERJ20223.1
Putative oxidoreductase protein.
 
0.717
ERJ20884.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
 
0.712
metH
Methionine synthase protein.
   
 0.709
metH2
5-methyltetrahydrofolate-homocysteine methyltransferase protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.709
ERJ20252.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
 
0.673
glpK
Glycerol kinase protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.663
ERJ20095.1
NAD-dependent oxidoreductase protein.
  
 
 0.648
ERJ19537.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
 
0.639
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.