STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19503.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
ERJ19504.1
DNA primase protein.
 
     0.792
ERJ19507.1
TonB-like protein.
 
     0.717
exbD
Biopolymer transport ExbD protein.
 
     0.675
ERJ19506.1
Putative biopolymer transmembrane protein.
 
     0.645
ERJ19141.1
Histidine ammonia-lyase protein.
 
     0.504
ERJ19547.1
D-serine dehydratase protein.
  
     0.472
ERJ20150.1
Heme oxygenase protein.
 
     0.458
ldh
Leucine dehydrogenase Ldh protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.458
ERJ19469.1
MxaD protein.
  
     0.409
ERJ19143.1
ExbD-TolR family protein.
 
     0.406
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.