STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19537.11-deoxy-D-xylulose-5-phosphate reductoisomerase protein. (331 aa)    
Predicted Functional Partners:
ERJ19501.1
Oxidoreductase protein.
 
0.639
ERJ19499.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
 
0.587
eno
Enolase protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
   
 
  0.561
tig
Trigger factor protein; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
       0.504
ERJ20130.1
D-threo-aldose 1-dehydrogenase protein.
  
     0.494
ERJ20137.1
Amidohydrolase 2 protein.
  
 
 0.442
ERJ18312.1
UDPglucose 6-dehydrogenase protein.
   
 
  0.436
ppiB
Peptidyl-prolyl cis-trans isomerase protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.429
ERJ19752.1
Glucose-fructose oxidoreductase protein.
    
  0.427
ERJ17558.1
Serine-pyruvate transaminase protein; Overlaps another CDS with the same product name.
  
 
  0.427
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.