STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19315.1Putative membrane protein. (171 aa)    
Predicted Functional Partners:
coxB1
Cytochrome c oxidase subunit 2 protein.
  
 
 0.861
katE
Catalase HPII protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.769
bfr
Bacterioferritin protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
  
 0.648
argH
Argininosuccinate lyase protein.
       0.541
ERJ18924.1
O-linked GlcNAc transferase protein.
  
     0.449
ERJ17642.1
1-acyl-sn-glycerol-3-phosphate acyltransferase protein.
  
  
 0.432
ERJ19277.1
PAS sensor diguanylate cyclase protein.
  
  
 0.419
ERJ19445.1
Hypothetical protein.
   
    0.410
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.