STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yojIPutative ABC-type multidrug-protein-lipid transport system. (558 aa)    
Predicted Functional Partners:
ERJ19166.1
Putative iron transport-related membrane protein.
 
    0.929
ysuI
Putative siderophore biosynthetic enzyme protein.
  
  
 0.774
ERJ19687.1
ABC Fe+3 hydroxamate transporter periplasmic siderophore binding protein.
 
    0.725
ERJ18531.1
Putative polyketide synthase protein.
 
  
 0.673
ada
O6-methylguanine-DNA methyltransferase protein.
      0.655
fhuB
Ferrichrome transport system permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.635
fhuC
ATP-binding component of hydroxymate-dependent iron ABC transporter protein.
 
    0.626
ERJ19249.1
Dimethylaniline monooxygenase N-oxide forming protein.
  
  
 0.614
mgtE
Mg++ transporter protein; Acts as a magnesium transporter.
      0.589
foxA
Ferrioxamine receptor FoxA protein.
 
  
 0.577
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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