STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19222.1Nitrilase protein. (282 aa)    
Predicted Functional Partners:
aguA
Agmatine deiminase putative protein; Belongs to the agmatine deiminase family.
 
 0.792
ERJ19223.1
AsmA-like region protein.
 
     0.781
speE
Spermidine synthase protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
 
 0.748
gltB
Glutamate synthase large chain protein.
    
 0.710
gdhA
NADP-specific glutamate dehydrogenase protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.685
ERJ18314.1
Bifunctional proline oxidoreductase-transcriptional repressor protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.657
lpdA
Dihydrolipoyl dehydrogenase protein.
     
 0.640
atuF
Geranyl-CoA carboxylase alpha-subunit protein.
    
  0.640
merR
Nitrilase protein.
     
 0.636
nadB
Putative L-aspartate oxidase protein; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.633
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.