STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19123.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
ERJ19122.1
TRAP transporter 4TM-12TM fusion protein.
 
    0.949
ERJ19124.1
TRAP transporter solute receptor TAXI family protein.
 
    0.935
ERJ18608.1
Pantothenate permease protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.648
ERJ19121.1
Hypothetical protein.
       0.539
ERJ19119.1
Membrane protein putative.
  
     0.535
ERJ18420.1
Immunogenic protein.
 
    0.514
ERJ19474.1
Putative membrane protein.
  
     0.503
ERJ18419.1
Transporter protein.
 
    0.499
fdhD
Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.470
yiuR
Putative outer membrane iron-siderophore receptor protein.
  
     0.464
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.