STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19147.1TRAP transporter DctQ-like membrane protein. (190 aa)    
Predicted Functional Partners:
ERJ19148.1
Ribonuclease III protein.
  
 0.941
ERJ20124.1
Putative large integral membrane transport protein.
  
 0.823
ERJ19149.1
Transporter periplasmic component protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.792
ERJ20126.1
Extracellular solute-binding protein family 7 bacteria.
 
    0.785
ERJ17981.1
Putative C4-dicarboxylate transporter protein.
     0.580
aaiD
Acyl-homoserine lactone acylase AaiD protein.
       0.447
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.