STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
egtBIron-dependent oxidoreductase EgtB protein. (376 aa)    
Predicted Functional Partners:
ERJ18945.1
Hypothetical protein.
 
 0.998
ERJ18946.1
Amidophosphoribosyltransferase protein.
 
 
 0.972
ERJ17647.1
Glycoprotein 3-alpha-L-fucosyltransferase.
  
   0.940
ERJ18159.1
Serine-threonine-protein kinase PpkA.
  
 
 0.708
ribBA
Bifunctional 34-dihydroxy-2-butanone 4-phosphate synthase-GTP cyclohydrolase II RibBA protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.653
ribA
Bifunctional riboflavin biosynthesis protein RibAB; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
    
  0.653
nadC
Nicotinate-nucleotide pyrophosphorylase carboxylating protein; Belongs to the NadC/ModD family.
  
    0.578
ERJ18620.1
Serine-threonine-protein kinase PpkA.
  
 
 0.564
gsh1
Glutamate-cysteine ligase protein; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
  
  
 0.519
ERJ19952.1
Selenocysteine lyase protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.429
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.