STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19010.1Protein of unknown function DUF58. (318 aa)    
Predicted Functional Partners:
ERJ19011.1
V-type H+-transporting ATPase subunit D protein.
  
 0.995
ERJ19009.1
MoxR protein.
 
  
 0.941
ERJ19012.1
NAD+ diphosphatase protein.
       0.773
pilP
Fimbrial assembly protein.
 
     0.762
ERJ17711.1
LysM domain protein.
 
     0.758
pilZ
Type 4 fimbrial biosis protein PilZ.
 
     0.756
pilN
Fimbrial assembly membrane protein; Overlaps another CDS with the same product name.
 
     0.754
pilO
Type 4 fimbrial biosis protein PilO.
 
     0.749
pilV
Pre-pilin leader sequence protein.
  
     0.744
pilS
Sensor protein PilS.
  
     0.734
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.