STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18871.1Tfp pilus assembly protein FimV-like protein. (262 aa)    
Predicted Functional Partners:
fimV
Motility protein FimV.
 
     0.876
pilN
Fimbrial assembly membrane protein; Overlaps another CDS with the same product name.
  
    0.800
pilO
Type 4 fimbrial biosis protein PilO.
  
  
 0.789
asd-2
Aspartate-semialdehyde dehydrogenase protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
    0.772
pilZ
Type 4 fimbrial biosis protein PilZ.
  
     0.771
ERJ17711.1
LysM domain protein.
  
   
 0.763
pilP
Fimbrial assembly protein.
  
    0.762
nudJ
NAD+ diphosphatase protein; Belongs to the Nudix hydrolase family. NudJ subfamily.
 
 
 0.756
pilS
Sensor protein PilS.
  
     0.730
ERJ17628.1
Fimbrial assembly protein; Overlaps CDS with the same product name.
  
  
 0.728
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.