STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18877.1Lipopolysaccharide export system ATP-binding protein; Belongs to the LysR transcriptional regulatory family. (295 aa)    
Predicted Functional Partners:
ERJ19089.1
Amidophosphoribosyltransferase protein; Belongs to the LysR transcriptional regulatory family.
  
     0.769
ERJ18062.1
Transcriptional regulator LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.675
ERJ19154.1
Transcriptional regulator LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.621
ERJ20134.1
Putative transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.555
leuC
3-isopropylmalate dehydratase large subunit protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
       0.545
ERJ18875.1
2-isopropylmalate synthase protein.
       0.535
leuD
3-isopropylmalate dehydratase small subunit protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
       0.454
ERJ19590.1
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.447
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.