STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yccAPutative TEGT family carrier protein; Belongs to the BI1 family. (223 aa)    
Predicted Functional Partners:
ERJ19223.1
AsmA-like region protein.
  
     0.628
nucA
Putative DNA-RNA non-specific endonuclease protein.
     
 0.598
ERJ18862.1
Threonine dehydratase protein.
  
    0.593
omlA
Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
    0.558
htpX
Protease HtpX protein; Belongs to the peptidase M48B family.
  
  
 0.541
yggT
Putative inner membrane protein.
  
     0.497
ERJ18893.1
Two-component system chemotaxis family sensor kinase CheA protein.
       0.451
ERJ18890.1
Response receiver sensor diguanylate cyclase PAS domain-containing protein.
       0.449
cheB
Protein-glutamate methylesterase.
       0.449
cheR
Chemotaxis protein.
       0.449
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.