STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysBTranscriptional regulator CysB protein; Belongs to the LysR transcriptional regulatory family. (326 aa)    
Predicted Functional Partners:
ERJ18897.1
Putative membrane protein.
 
     0.610
mucB
Putative sigma factor regulatory protein.
  
     0.574
ERJ19775.1
Transcriptional regulator LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.555
cysG
Siroheme synthase protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
 
   
 0.489
hemX
Uroporphyrin-III C-methyltransferase HemX protein.
  
     0.476
ERJ19118.1
Two-component system chemotaxis family sensor kinase CheA protein; Belongs to the LysR transcriptional regulatory family.
  
     0.475
ERJ20134.1
Putative transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.473
omlA
Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.472
ERJ18731.1
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.466
ERJ19449.1
dTDP-4-dehydrorhamnose reductase protein; Belongs to the LysR transcriptional regulatory family.
  
     0.450
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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