STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18771.1Butyrate kinase protein. (288 aa)    
Predicted Functional Partners:
ERJ20438.1
Type III restriction enzyme res subunit protein.
   
   0.860
sps
Sucrose phosphate synthase protein.
  
 
 0.821
ERJ20174.1
Unspecific monooxygenase protein.
   
 0.784
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.771
tra5
IS1501-like protein transposase.
    
  0.755
ERJ18583.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.747
pgsA
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.747
ERJ17930.1
CDP-alcohol phosphatidyltransferase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.747
ERJ18770.1
Hypothetical protein.
 
     0.728
cdsA
Phosphatidate cytidylyltransferase protein; Belongs to the CDS family.
     
 0.675
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.