STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18780.1Phospholipase patatin family protein. (219 aa)    
Predicted Functional Partners:
ERJ18756.1
Putative membrane protein.
  
     0.499
comA
DNA uptake-competence protein.
     
 0.491
ERJ18071.1
Long-chain acyl-CoA synthetase protein.
  
 
 0.451
ERJ20538.1
1-acyl-sn-glycerol-3-phosphate acyltransferase protein.
 
  
  0.450
ERJ19066.1
PGAP1-like protein.
  
  
 0.448
ERJ19027.1
5-methyltetrahydrofolate--homocysteine methyltransferase protein.
  
    0.448
ERJ20759.1
Glycerol-3-phosphate dehydrogenase protein.
     
 0.445
pssA
Phosphatidylserine synthase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
  0.441
sunT
ABC transporter ATP-binding protein.
  
  
  0.437
ERJ20317.1
Lipase protein.
 
  
  0.437
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.