STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18829.1Hydroxyacylglutathione hydrolase protein. (273 aa)    
Predicted Functional Partners:
thiF
Thiamine biosynthesis protein.
  
 0.809
ERJ18190.1
Dioxygenase protein.
  
 
 0.686
ERJ20393.1
Manganese-containing catalase protein.
  
     0.666
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.654
ERJ20750.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
    
  0.633
ERJ17588.1
Catechol 23-dioxygenase protein.
   
 
 0.629
ERJ18828.1
Hypothetical protein.
       0.605
ERJ19644.1
Sulfide dehydrogenase flavoprotein subunit.
    
  0.598
ERJ19645.1
Flavocytochrome C flavoprotein subunit.
    
  0.598
ERJ17998.1
Alcohol dehydrogenase protein.
  
    0.469
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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