STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcFPutative glycolate oxidase iron-sulfur subunit protein. (410 aa)    
Predicted Functional Partners:
glcE
Glycolate oxidase subunit protein.
 
 0.997
ERJ18716.1
Glycolate oxidase subunit GlcD protein.
 
 0.974
ERJ20441.1
Putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase.
 
 0.888
glcG
Protein GlcG.
 
  
 0.787
lldG
L-lactate dehydrogenase complex protein LldG.
  
 
 0.756
glcB
Malate synthase G protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.756
gltB
Glutamate synthase large chain protein.
    
 0.720
thiF
Thiamine biosynthesis protein.
    
  0.709
lpdA
Dihydrolipoyl dehydrogenase protein.
  
 
 0.698
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
    
 0.669
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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