STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18583.1CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (221 aa)    
Predicted Functional Partners:
ERJ18582.1
Phosphoserine phosphatase protein.
    
  0.842
yabI
Inner membrane protein YabI.
  
 
 0.747
ERJ18771.1
Butyrate kinase protein.
  
 
 0.747
rodZ
Cytoskeleton protein RodZ.
  
    0.713
gpsA
Glycerol-3-phosphate dehydrogenase NAD+ protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.696
pcaC
4-carboxymuconolactone decarboxylase protein.
    
  0.668
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
       0.651
ERJ18168.1
Cro/C1-type HTH domain protein.
  
    0.567
yibN
Putative rhodanese-related sulfurtransferase protein.
  
    0.544
psd
Phosphatidylserine decarboxylase proenzyme protein.
    
 0.536
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.