STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxYSulfur oxidation protein. (298 aa)    
Predicted Functional Partners:
ERJ18480.1
Cytochrome C protein.
 
  
 0.956
ERJ18483.1
Extracellular solute-binding protein.
 
  
  0.953
ERJ18481.1
Beta-lactamase protein.
 
     0.948
ERJ18484.1
Hypothetical protein.
 
     0.944
ERJ18485.1
Hypothetical protein.
 
     0.909
xoxF
Putative pqq dehydrogenase protein.
 
  
  0.886
ERJ17593.1
Alkaline phosphatase protein; Belongs to the 5'-nucleotidase family.
   
 0.870
ERJ18210.1
PHP domain protein.
   
 0.850
moxJ
MoxJ protein.
 
  
  0.803
ccoP
Cytochrome c oxidase cbb3-type subunit III protein.
 
  
 0.792
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.