STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18526.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
wcaJ
Putative UDP-glucose lipid carrier transferase protein.
    
  0.920
ERJ18518.1
Capsular polysaccharide biosynthesis protein.
    
 0.874
ERJ18517.1
Polysaccharide export protein EpsE.
    
  0.863
ERJ18519.1
Capsular exopolysaccharide family protein.
    
  0.856
exoQ
Exopolysaccharide production protein.
       0.786
ERJ18523.1
Asparagine synthase protein.
       0.774
ERJ18524.1
Dolichol-phosphate mannosyltransferase protein.
       0.774
ERJ18522.1
Glycoprotein 3-alpha-L-fucosyltransferase.
       0.758
ERJ18521.1
Neuraminidase protein.
       0.757
wzc
Protein-tyrosine kinase chainlength regulator in capsular polysaccharide biosynthesi.
    
 0.741
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.