STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18541.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
ERJ18432.1
Hypothetical protein.
  
     0.700
ERJ18770.1
Hypothetical protein.
  
     0.654
ERJ17680.1
Rho termination factor protein.
 
     0.639
ERJ18538.1
Putative DNA topoisomerase I protein.
 
     0.614
ERJ18176.1
Transporter protein.
 
     0.614
ERJ18540.1
Haloacetate dehalogenase protein.
       0.594
ERJ18542.1
Hypothetical protein.
       0.586
yfdC
Inner membrane protein YfdC.
 
     0.516
ERJ18170.1
Putative DNA-binding protein.
  
     0.490
ERJ20667.1
Hypothetical protein.
  
     0.442
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.