STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18406.1Tautomerase protein. (132 aa)    
Predicted Functional Partners:
ERJ18190.1
Dioxygenase protein.
  
 
 0.761
ERJ17588.1
Catechol 23-dioxygenase protein.
  
 
 0.761
hpcG
2-oxo-hepta-3-ene-17-dioic acid hydratase protein.
    
 0.722
dadA
D-amino acid dehydrogenase small subunit protein.
    
  0.617
cobC
Threonine-phosphate decarboxylase protein.
    
  0.435
hisC2
Histidinol-phosphate aminotransferase 2 protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
  0.435
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.419
ERJ19447.1
Catechol 23-dioxygenase protein.
    
 0.401
ERJ17911.1
Lactoylglutathione lyase protein.
    
 0.401
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.