STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18323.1Sulfoquinovosyltransferase protein. (376 aa)    
Predicted Functional Partners:
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase protein; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
 
 
  0.846
rfaG
Lipopolysaccharide core biosynthesis protein RfaG.
 
     0.838
ERJ18330.1
Glycoprotein 3-alpha-L-fucosyltransferase.
  
     0.765
ERJ17434.1
UDP-glucoseLPS alpha-13-glucosyltransferase protein.
  
     0.757
kdkA
3-deoxy-D-manno-octulosonic acid kinase protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
 
  0.742
ERJ17435.1
Glycoprotein 3-alpha-L-fucosyltransferase.
  
     0.741
xanB
Xanthan biosynthesis protein XanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.689
ERJ20939.1
Glycoprotein 3-alpha-L-fucosyltransferase; Overlaps CDS with the same product name.
  
     0.687
ERJ18324.1
Lipopolysaccharide kinase protein.
       0.658
ERJ17933.1
Type III pantothenate kinase protein.
  
     0.617
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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