STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18327.1Polysaccharide deacetylase protein. (287 aa)    
Predicted Functional Partners:
ERJ17648.1
Glycosyltransferase protein.
  
 
 0.812
ERJ19609.1
5-hydroxyisourate hydrolase protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 
  0.759
ERJ18328.1
12-diacylglycerol 3-glucosyltransferase protein.
 
     0.607
ERJ18329.1
Asparagine synthase protein.
 
     0.552
wcaJ
Putative UDP-glucose lipid carrier transferase protein.
 
   
 0.480
ERJ18518.1
Capsular polysaccharide biosynthesis protein.
 
     0.417
ERJ18529.1
Alpha-beta hydrolase fold protein.
 
     0.403
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.