STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfuBIron transporter-like protein. (502 aa)    
Predicted Functional Partners:
ibp
Iron-binding protein.
 
 0.999
potA1
Spermidine-putrescine ABC transporter ATP-binding domain containing protein; Belongs to the ABC transporter superfamily.
 
 0.990
ERJ18364.1
Fumarate hydratase class II protein.
       0.801
cysC
Adenylyl-sulfate kinase protein; Catalyzes the synthesis of activated sulfate.
     
 0.627
thiG
Thiazole synthase protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.536
btuF
Putative vitamin B12 transport protein.
  
    0.528
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
 
  0.518
ERJ19027.1
5-methyltetrahydrofolate--homocysteine methyltransferase protein.
  
 
  0.488
ERJ18362.1
Hypothetical protein.
       0.459
ERJ18363.1
Hypothetical protein.
       0.459
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.