STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18370.1Long-chain acyl-CoA synthetase protein. (565 aa)    
Predicted Functional Partners:
ERJ18531.1
Putative polyketide synthase protein.
  
0.928
aas
2-acylglycerophosphoethanolamine acyltransferase protein.
 
  
  0.911
ERJ20173.1
Long-chain-fatty-acid--acyl-carrier-protein ligase.
 
    
0.842
ERJ18530.1
Alpha-beta hydrolase fold protein; Overlaps CDS with the same product name.
  
 0.782
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.756
ERJ20174.1
Unspecific monooxygenase protein.
   
 0.730
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
  
 0.712
ERJ18893.1
Two-component system chemotaxis family sensor kinase CheA protein.
    
 0.705
ERJ20574.1
Long-chain-fatty-acid--acyl-carrier-protein ligase.
 
    
0.671
yabI
Inner membrane protein YabI.
    
  0.646
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.