STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18239.1Pressure-regulated protein. (151 aa)    
Predicted Functional Partners:
hmp
Flavohemoprotein; Belongs to the globin family.
  
  
 0.723
ERJ17473.1
Outer membrane protein CzcC.
  
    0.596
azu
Azurin protein; Transfers electrons from cytochrome c551 to cytochrome oxidase.
       0.588
ERJ18241.1
Cbb3-type cytochrome oxidase assembly protein disulfide bond oxidoreductase DsbD family protein.
 
     0.544
ccoQ
Cbb3-type cytochrome c oxidase subunit IV CcoQ protein.
       0.459
ERJ18242.1
Cytochrome oxidase maturation protein cbb3-type.
       0.456
ERJ18243.1
K+-transporting ATPase ATPase B chain protein.
       0.456
ERJ18244.1
FixH domain containing protein.
       0.456
ERJ18245.1
Putative ferredoxin protein.
       0.456
ERJ18246.1
Putative inner membrane protein.
       0.456
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.