STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18291.1Adenylate cyclase protein. (157 aa)    
Predicted Functional Partners:
ERJ18292.1
ErfK-YbiS-YcfS-YnhG family protein.
       0.801
rlmD
Putative SAM-dependent methyltransferase ral function prediction only protein; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
 
     0.732
nagZ
Beta-hexosaminidase protein.
       0.728
ERJ18295.1
Hypoxanthine phosphoribosyltransferase protein.
       0.728
ERJ18296.1
5'-methylthioadenosine phosphorylase protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
       0.728
ERJ19277.1
PAS sensor diguanylate cyclase protein.
    
  0.709
ERJ18394.1
Two-component system NarL family capsular synthesis sensor histidine kinase RcsC protein.
    
  0.706
ERJ18816.1
Two-component system OmpR family phosphate regulon sensor histidine kinase PhoR protein.
    
  0.705
ERJ18814.1
Diguanylate cyclase protein.
    
  0.704
ERJ18900.1
Two-component system chemotaxis family CheB-CheR fusion protein.
    
  0.693
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.