STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18292.1ErfK-YbiS-YcfS-YnhG family protein. (167 aa)    
Predicted Functional Partners:
ERJ18295.1
Hypoxanthine phosphoribosyltransferase protein.
 
     0.812
ERJ18291.1
Adenylate cyclase protein.
       0.801
ERJ18296.1
5'-methylthioadenosine phosphorylase protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
 
     0.780
nagZ
Beta-hexosaminidase protein.
       0.728
ERJ18294.1
Small-conductance mechanosensitive channel protein.
       0.728
rlmD
Putative SAM-dependent methyltransferase ral function prediction only protein; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
       0.697
cysM
Cysteine synthase B protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.570
mpl
UDP-N-acetylmuramateL-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase protein; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.
  
 0.458
pdxJ
Pyridoxine 5'-phosphate synthase protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
 
     0.457
murC
UDP-N-acetylmuramate--L-alanine ligase protein; Cell wall formation; Belongs to the MurCDEF family.
   
 0.448
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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