STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18169.1uracil-DNA glycosylase protein. (497 aa)    
Predicted Functional Partners:
ERJ18170.1
Putative DNA-binding protein.
     0.955
ERJ19021.1
uracil-DNA glycosylase protein.
  
  
 
0.718
ERJ18534.1
uracil-DNA glycosylase protein.
     
0.637
dnaE2
Error-prone DNA polymerase protein; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
      0.613
ERJ18171.1
Chemotaxis protein; Overlaps another CDS with the same product name.
  
    0.517
mcpA
Chemotaxis protein; Overlaps another CDS with the same product name.
       0.513
ERJ18168.1
Cro/C1-type HTH domain protein.
       0.447
ERJ19390.1
Pyrophosphoryl-undecaprenol N-acetylglucosamine transferase protein.
  
     0.433
ssb
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
   0.420
ERJ18541.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.