STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18096.1Cytochrome c lipoprotein. (975 aa)    
Predicted Functional Partners:
ERJ20604.1
Ubiquinol-cytochrome c reductase cytochrome b subunit protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.949
ccoN
Cytochrome c oxidase cbb3-type subunit I protein; Belongs to the heme-copper respiratory oxidase family.
  
 0.926
ccoO
Cbb3-type cytochrome c oxidase subunit II CcoO protein.
  
 0.920
coxB1
Cytochrome c oxidase subunit 2 protein.
   
 0.886
norB
Nitric oxide reductase subunit B protein.
  
 0.875
ERJ18238.1
Nitrite reductase protein; Belongs to the multicopper oxidase family.
  
 0.852
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.840
ERJ18097.1
Putative two component system DNA binding response regulator protein.
 
     0.828
nasA
Nitrate reductase large subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.810
ERJ19752.1
Glucose-fructose oxidoreductase protein.
   
   0.807
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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