STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ18108.1Carbonic anhydrase protein. (208 aa)    
Predicted Functional Partners:
ERJ18835.1
Phospholipiddiacylglycerol acyltransferase protein.
    
 0.986
ERJ19633.1
Chemotaxis protein methyltransferase CheR.
 
 0.972
cbbS
Ribulose bisphosphate carboxylase small chain protein.
    
 0.965
cynS
Cyanate hydratase protein; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
  
 
 0.871
yfdC
Inner membrane protein YfdC.
  
    0.723
ERJ18160.1
Formate-nitrate transporter protein.
  
    0.723
ERJ18176.1
Transporter protein.
  
    0.723
ERJ20155.1
Adenine phosphoribosyltransferase protein.
   
    0.696
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
  
  
 0.507
cbbL
Ribulose bisphosphate carboxylase large chain protein; Belongs to the RuBisCO large chain family.
    
 
 0.420
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.