STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH124-dienoyl-CoA reductase FadH1 protein. (675 aa)    
Predicted Functional Partners:
etfB
Electron transfer flavoprotein beta subunit.
  
 
 0.999
gltB
Glutamate synthase large chain protein.
  
 0.999
ERJ20277.1
Glutamate synthase protein; Belongs to the glutamate synthase family.
 
 0.993
etfA
Electron transfer flavoprotein alpha subunit.
  
 
 0.987
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.901
ERJ20122.1
ferredoxin--NAD+ reductase protein.
  
 0.892
ERJ17829.1
ferredoxin--NAD+ reductase protein.
  
 0.892
paaE
Putative phenylacetic acid degradation NADH oxidoreductase PaaE protein.
  
 0.892
ycbX
Putative 2Fe-2S cluster-containing protein.
   
 0.887
ERJ17576.1
2Fe-2S iron-sulfur cluster binding domain protein.
   
 0.886
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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