STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdsDNAD-dependent formate dehydrogenase delta subunit protein. (91 aa)    
Predicted Functional Partners:
fdsA
NAD-dependent formate dehydrogenase alpha subunit protein.
 
 0.996
ERJ18066.1
NADH ubiquinone oxidoreductase chain E protein.
 
 
 0.994
yjgC
Putative oxidoreductase YjgC protein.
 
 0.964
ERJ18065.1
NADH ubiquinone oxidoreductase chain F protein.
 
 
 0.957
nuoE
NADH-quinone oxidoreductase subunit E protein.
   
 0.815
nuoF
NADH-quinone oxidoreductase subunit F protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.725
ERJ18062.1
Transcriptional regulator LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.674
lhgO
L-2-hydroxyglutarate oxidase LhgO protein.
     
 0.637
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.524
ccoP
Cytochrome c oxidase cbb3-type subunit III protein.
  
     0.481
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.