STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17956.1Galactose oxidase protein. (881 aa)    
Predicted Functional Partners:
ERJ17957.1
Hypothetical protein.
       0.790
ERJ17958.1
Superoxide dismutase Cu-Zn protein.
       0.773
ERJ20844.1
Acetoacetate decarboxylase protein.
  
     0.526
ERJ18598.1
Membrane lipoprotein.
  
     0.517
ERJ20468.1
Mandelate racemase protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.504
ERJ19101.1
DNA ligase protein.
  
    0.491
ERJ20227.1
Putative membrane protein.
  
     0.467
ERJ18768.1
Glutathione S-transferase protein.
  
     0.441
ERJ18210.1
PHP domain protein.
  
     0.421
purH
Bifunctional purine biosynthesis protein PurH.
       0.410
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.