STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17880.1Bilirubin oxidase protein. (529 aa)    
Predicted Functional Partners:
ERJ19580.1
Cb-type cytochrome c oxidase subunit III protein.
    
   0.860
ERJ19848.1
Copper-binding protein putative.
 
  
 0.737
ctaC
Cytochrome c oxidase subunit 2 protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.719
guaA
GMP synthase glutamine-hydrolyzing protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.711
ERJ17615.1
Two-component system chemotaxis family CheB-CheR fusion protein; Overlaps another CDS with the same product name.
  
 
 0.681
nasA
Nitrate reductase large subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.676
ERJ18900.1
Two-component system chemotaxis family CheB-CheR fusion protein.
  
 
 0.668
ERJ18247.1
Cbb3-type cytochrome c oxidase subunit protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.668
ERJ18394.1
Two-component system NarL family capsular synthesis sensor histidine kinase RcsC protein.
  
 
 0.651
ERJ18955.1
Two-component system NarL family sensor histidine kinase BarA protein.
  
 
 0.647
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.