STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilVPre-pilin leader sequence protein. (184 aa)    
Predicted Functional Partners:
ERJ17891.1
Tfp pilus assembly protein PilW-like protein.
 
  
 0.993
pilX
Type 4 fimbrial biosis protein PilX.
 
  
 0.990
ERJ17893.1
Type IV pilus assembly protein PilY1.
 
  
 0.986
ERJ17894.1
Type IV minor pilin protein PilE.
 
  
 0.980
fimT
Pre-pilin like leader sequence protein.
 
  
 0.977
pilN
Fimbrial assembly membrane protein; Overlaps another CDS with the same product name.
 
   
 0.817
pilP
Fimbrial assembly protein.
  
  
 0.816
pilO
Type 4 fimbrial biosis protein PilO.
 
   
 0.814
ERJ17628.1
Fimbrial assembly protein; Overlaps CDS with the same product name.
 
   
 0.797
pilZ
Type 4 fimbrial biosis protein PilZ.
  
   
 0.774
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.