STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17942.1Flavoprotein oxygenase. (208 aa)    
Predicted Functional Partners:
ERJ19344.1
Flavin dependent oxidoreductase protein.
  
 
 0.805
ERJ19381.1
Dihydrolipoamide dehydrogenase protein; Accepts electrons from ETF and reduces ubiquinone.
    
 0.733
ERJ18190.1
Dioxygenase protein.
  
 
 0.732
ERJ17588.1
Catechol 23-dioxygenase protein.
  
 
 0.732
ERJ20747.1
FMN reductase protein.
    
 0.698
ERJ18531.1
Putative polyketide synthase protein.
     
 0.663
ribF
Riboflavin biosynthesis protein; Belongs to the ribF family.
    
  0.658
ERJ18296.1
5'-methylthioadenosine phosphorylase protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
    
  0.654
pyrD
Dihydroorotate dehydrogenase protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
  0.639
ribC
Riboflavin synthase alpha chain protein.
    
  0.628
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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