STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17771.1Nucleoside diphosphate-linked moiety X motif 19 protein. (231 aa)    
Predicted Functional Partners:
ERJ17770.1
Hydroxyacylglutathione hydrolase protein.
     0.993
thiF
Thiamine biosynthesis protein.
  
 0.809
ERJ18453.1
Thioesterase-like superfamily protein.
  
     0.673
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.654
ERJ20750.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
    
  0.633
ERJ18190.1
Dioxygenase protein.
   
 
 0.629
ERJ17588.1
Catechol 23-dioxygenase protein.
   
 
 0.629
ERJ17772.1
Putative gamma-glutamylcyclotransferase protein.
 
     0.617
ERJ19644.1
Sulfide dehydrogenase flavoprotein subunit.
    
  0.598
ERJ19645.1
Flavocytochrome C flavoprotein subunit.
    
  0.598
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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