STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnoShort-chain dehydrogenase-reductase protein. (255 aa)    
Predicted Functional Partners:
nuoC
NADH-quinone oxidoreductase subunit C-D protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.958
ERJ19679.1
3a7a12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase protein.
 
    
0.923
ERJ19722.1
Haloacetate dehalogenase protein.
 
 
  0.897
ERJ18531.1
Putative polyketide synthase protein.
  
 0.875
ERJ19701.1
O-methyltransferase protein.
 
      0.854
gltB
Glutamate synthase large chain protein.
     
 0.783
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
  
 
 0.674
ERJ19335.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
 
 
  0.648
ERJ18857.1
Oxidoreductase short-chain dehydrogenase-reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.634
xanB
Xanthan biosynthesis protein XanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.628
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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