STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilMFimbrial assembly membrane protein; Overlaps another CDS with the same product name. (344 aa)    
Predicted Functional Partners:
pilN
Fimbrial assembly membrane protein; Overlaps another CDS with the same product name.
 
 0.999
ERJ17628.1
Fimbrial assembly protein; Overlaps CDS with the same product name.
 
 
 0.996
pilO
Type 4 fimbrial biosis protein PilO.
 
 
 0.995
pilP
Fimbrial assembly protein.
 
 
 0.994
ERJ17711.1
LysM domain protein.
  
 
   0.959
pilC
Type 4 fimbrial assembly protein PilC.
 
 
 
 0.879
pilT
Twitching motility protein.
 
   
 0.855
pilB
Type 4 fimbrial assembly protein PilB.
 
 
 
 0.846
ERJ17894.1
Type IV minor pilin protein PilE.
 
   
 0.823
pilU
Pilus retraction ATPase PilU protein.
  
  
 0.810
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.